nrnmusic.cpp

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#define NO_PYTHON_H 1
#include <../neuronmusic/nrnmusic.h>
#include <unordered_map>
 
extern int nrnmusic;
extern MPI_Comm nrnmusic_comm;
 
void nrnmusic_init(int*, char***);
void nrnmusic_terminate();
 
void nrnmusic_injectlist(void* vp, double tt);
void nrnmusic_inject(void* port, int gindex, double tt);
void nrnmusic_spikehandle(void* vport, double tt, int gindex);
 
extern Object* nrnpy_po2ho(PyObject*);
extern PyObject* nrnpy_ho2po(Object*);
extern Object* hoc_new_object(Symbol*, void*);
 
MUSIC::Setup* nrnmusic_setup;
MUSIC::Runtime* nrnmusic_runtime;
 
class NrnMusicEventHandler: public MUSIC::EventHandlerLocalIndex {
  public:
    void operator()(double t, MUSIC::LocalIndex id);
    void filltable(NRNMUSIC::EventInputPort*, int);
    PreSyn** table;
};
 
class MusicPortPair {
  public:
    MusicPortPair(void* port, int gindex, void* p);
    virtual ~MusicPortPair();
    void clear();  // avoid recursion on delete by first calling clear
    void* port_;
    int gindex_;
    MusicPortPair* next_;
};
MusicPortPair::MusicPortPair(void* port, int gindex, void* vp) {
    port_ = port;
    gindex_ = gindex;
    next_ = (MusicPortPair*) vp;
}
MusicPortPair::~MusicPortPair() {
    if (next_) {
        delete next_;
    }
}
void MusicPortPair::clear() {
    MusicPortPair *i, *j;
    for (i = next_; i; i = j) {
        j = i->next_;
        i->next_ = 0;
        delete i;
    }
}
 
class NetParMusicEvent: public DiscreteEvent {
  public:
    NetParMusicEvent();
    virtual ~NetParMusicEvent();
    virtual void send(double, NetCvode*, NrnThread*);
    virtual void deliver(double, NetCvode*, NrnThread*);
    virtual int type() {
        return 100;
    }
};
static NetParMusicEvent* npme;
 
using PortTable = std::unordered_map<void*, int>;
static PortTable* music_input_ports;
static PortTable* music_output_ports;
 
NetParMusicEvent::NetParMusicEvent() {}
NetParMusicEvent::~NetParMusicEvent() {}
void NetParMusicEvent::send(double t, NetCvode* nc, NrnThread* nt) {
    nc->event(t + usable_mindelay_, this, nt);
}
void NetParMusicEvent::deliver(double t, NetCvode* nc, NrnThread* nt) {
    nrnmusic_runtime->tick();
    send(t, nc, nt);
}
 
void alloc_music_space() {
    if (music_input_ports) {
        return;
    }
    music_input_ports = new PortTable();
    music_output_ports = new PortTable();
}
 
void nrnmusic_injectlist(void* vp, double tt) {
    MusicPortPair* mpp;
    for (mpp = (MusicPortPair*) vp; mpp; mpp = mpp->next_) {
        nrnmusic_inject(mpp->port_, mpp->gindex_, tt);
    }
}
 
void nrnmusic_inject(void* vport, int gi, double tt) {
    // printf("nrnmusic_inject %p %d %g\n", vport, gi, tt);
    ((MUSIC::EventOutputPort*) vport)
        ->insertEvent(tt / 1000.0,  // unit conversion ms -> s
                      (MUSIC::GlobalIndex) gi);
}
 
void NrnMusicEventHandler::filltable(NRNMUSIC::EventInputPort* port, int cnt) {
    table = new PreSyn*[cnt];
    int j = 0;
    for (const auto& iter: *(port->gi_table)) {
        PreSyn* ps = iter.second;
        table[j] = ps;
        ++j;
    }
}
 
void NrnMusicEventHandler::operator()(double t, MUSIC::LocalIndex id) {
    PreSyn* ps = table[id];
    ps->send(1000.0 * t, net_cvode_instance, nrn_threads);
    // printf("event handler t=%g id=%d ps=%p\n", t, int(id), ps);
}
 
NRNMUSIC::EventOutputPort* NRNMUSIC::publishEventOutput(std::string id) {
    return new NRNMUSIC::EventOutputPort(nrnmusic_setup, id);
}
 
void NRNMUSIC::EventOutputPort::gid2index(int gid, int gi) {
    // analogous to pc.cell
    // except pc.cell(gid, nc) has already been called and this
    // will add this to the PreSyn.music_out_ list.
    alloc_music_space();
    auto iter = gid2out_.find(gid);
    if (iter == gid2out_.end()) {
        return;
    }
    PreSyn* ps = iter->second;
    ps->music_port_ = new MusicPortPair((void*) this, gi, ps->music_port_);
 
    // to create an IndexList for a later map, need to
    // save the indices used for each port
    int i = 0;
    if (music_output_ports->count((void*) this) == 0) {
        (*music_output_ports)[(void*) this] = i;
        gi_table = new Gi2PreSynTable(1024);
    }
    nrn_assert(gi_table->count(gi) == 0);
    // printf("gid2index insert %p %d\n", this, gi);
    (*gi_table)[gi] = ps;
}
 
NRNMUSIC::EventInputPort::EventInputPort(MUSIC::Setup* s, std::string id)
    : MUSIC::Port(s, id)
    , MUSIC::EventInputPort(s, id) {
    gi_table = new Gi2PreSynTable(1024);
}
 
NRNMUSIC::EventInputPort* NRNMUSIC::publishEventInput(std::string id) {
    return new NRNMUSIC::EventInputPort(nrnmusic_setup, id);
}
 
PyObject* NRNMUSIC::EventInputPort::index2target(int gi, PyObject* ptarget) {
    // analogous to pc.gid_connect
    Object* target = nrnpy_po2ho(ptarget);
    if (!is_point_process(target)) {
        hoc_execerror("target arg must be a Point_process", 0);
    }
    alloc_music_space();
    PreSyn* ps;
    int i = 0;
    if (music_input_ports->count((void*) this) == 0) {
        (*music_input_ports)[(void*) this] = i;
    }
    // nrn_assert (gi_table.count(gi) == 0);
    if (gi_table->count(gi) == 0) {
        ps = new PreSyn(NULL, NULL, NULL);
        net_cvode_instance->psl_append(ps);
        (*gi_table)[gi] = ps;
        ps->gid_ = -2;
        ps->output_index_ = -2;
    } else {
        ps = (*gi_table)[gi];
    }
    NetCon* nc = new NetCon(ps, target);
    Object* o = hoc_new_object(netcon_sym_, nc);
    nc->obj_ = o;
    PyObject* po = nrnpy_ho2po(o);
    // printf("index2target %d %s\n", gi, hoc_object_name(target));
    return po;
}
 
void nrnmusic_init(int* pargc, char*** pargv) {
    int i;
    int& argc = *pargc;
    char**& argv = *pargv;
    if (strlen(argv[0]) >= 5 && strcmp(argv[0] + strlen(argv[0]) - 5, "music") == 0) {
        nrnmusic = 1;
    }
    for (i = 0; i < argc; ++i) {
        if (strcmp(argv[i], "-music") == 0) {
            nrnmusic = 1;
        }
    }
    if (getenv("_MUSIC_CONFIG_"))
        nrnmusic = 1;  // temporary kludge
    if (nrnmusic) {
        nrnmusic_setup = new MUSIC::Setup(argc, argv);
        nrnmusic_comm = nrnmusic_setup->communicator();
    }
}
 
void nrnmusic_terminate() {
    if (!nrnmusic_runtime) {
        nrnmusic_runtime = new MUSIC::Runtime(nrnmusic_setup, 1);
    }
    nrnmusic_runtime->finalize();
    delete nrnmusic_runtime;
}
 
// Called from nrn_spike_exchange_init so usable_mindelay is ready to use
// For now, can only be called once.
static void nrnmusic_runtime_phase() {
    static int called = 0;
    assert(!called);
    called = 1;
 
    // call map on all the input ports
    for (const auto& iter: *music_input_ports) {
        NRNMUSIC::EventInputPort* eip = (NRNMUSIC::EventInputPort*) iter.first;
        NrnMusicEventHandler* eh = new NrnMusicEventHandler();
        Gi2PreSynTable* pst = eip->gi_table;
        std::vector<MUSIC::GlobalIndex> gindices;
        // iterate over pst and create indices
        int cnt = 0;
        for (const auto& j: *pst) {
            int gi = j.first;
            // printf("input port eip=%p gi=%d\n", eip, gi);
            gindices.push_back(gi);
            ++cnt;
        }
        eh->filltable(eip, cnt);
        MUSIC::PermutationIndex indices(&gindices.front(), gindices.size());
        eip->map(&indices, eh, usable_mindelay_ / 1000.0);
        delete eip->gi_table;
    }
    delete music_input_ports;
 
    // call map on all the output ports
    for (const auto& i: *music_output_ports) {
        NRNMUSIC::EventOutputPort* eop = (NRNMUSIC::EventOutputPort*) i.first;
        Gi2PreSynTable* pst = eop->gi_table;
        std::vector<MUSIC::GlobalIndex> gindices;
        // iterate over pst and create indices
        for (const auto& j: *pst) {
            int gi = j.first;
            // printf("output port eop=%p gi = %d\n", eop, gi);
            gindices.push_back(gi);
        }
        MUSIC::PermutationIndex indices(&gindices.front(), gindices.size());
        eop->map(&indices, MUSIC::Index::GLOBAL);
        delete eop->gi_table;
    }
    delete music_output_ports;
 
    // switch to the runtime phase
    // printf("usable_mindelay = %g\n", usable_mindelay_);
    nrnmusic_runtime = new MUSIC::Runtime(nrnmusic_setup, usable_mindelay_ / 1000.0);
    npme = new NetParMusicEvent();
    npme->send(0, net_cvode_instance, nrn_threads);
}