occvode.cpp File Reference

#include <../../nrnconf.h>
#include <errno.h>
#include <InterViews/resource.h>
#include <OS/string.h>
#include "nrnoc2iv.h"
#include "nrndaspk.h"
#include "cvodeobj.h"
#include "netcvode.h"
#include "ivocvect.h"
#include "vrecitem.h"
#include "membfunc.h"
#include "nonvintblock.h"
#include "spmatrix.h"

Go to the source code of this file.

Macros
#define	VECTORIZE   1
#define	nt_dt   nrn_threads->_dt
#define	nt_t   nrn_threads->_t
#define	SETUP   1
#define	USED   2

Functions
void	setup_topology ()
void	v_setup_vectors ()
void	nrn_mul_capacity (NrnThread *, Memb_list *)
void	nrn_div_capacity (NrnThread *, Memb_list *)
void	recalc_diam ()
int	nrn_errno_check (int)
void	long_difus_solve (int, NrnThread *)
void	nrndae_dkmap (double **, double **)
void *	nrn_multisplit_triang (NrnThread *)
void *	nrn_multisplit_reduce_solve (NrnThread *)
void *	nrn_multisplit_bksub (NrnThread *)
void	nrn_multisplit_nocap_v ()
void	nrn_multisplit_nocap_v_part1 (NrnThread *)
void	nrn_multisplit_nocap_v_part2 (NrnThread *)
void	nrn_multisplit_nocap_v_part3 (NrnThread *)
void	nrn_multisplit_adjust_rhs (NrnThread *)
void	nrn_extra_scatter_gather (int, int)
static void *	gather_y_thread (NrnThread *nt)
static void *	gather_ydot_thread (NrnThread *nt)
static void *	nonode_thread (NrnThread *nt)

Variables
int	diam_changed
Symlist *	hoc_built_in_symlist
double *	sp13mat
void(*	nrnthread_v_transfer_ )(NrnThread *)
void(*	nrnmpi_v_transfer_ )()
void(*	nrn_multisplit_setup_ )()
static Symbol *	vsym
static Cvode *	gather_cv
static N_Vector	gather_vec
static Cvode *	nonode_cv

Macro Definition Documentation

nt_dt

#define nt_dt   nrn_threads->_dt

Definition at line 21 of file occvode.cpp.

nt_t

#define nt_t   nrn_threads->_t

Definition at line 22 of file occvode.cpp.

SETUP

#define SETUP   1

Definition at line 50 of file occvode.cpp.

USED

#define USED   2

Definition at line 51 of file occvode.cpp.

VECTORIZE

#define VECTORIZE   1

Definition at line 2 of file occvode.cpp.

Function Documentation

gather_y_thread()

static void* gather_y_thread ( NrnThread *  nt )

static

Definition at line 485 of file occvode.cpp.

gather_ydot_thread()

static void* gather_ydot_thread ( NrnThread *  nt )

static

Definition at line 516 of file occvode.cpp.

long_difus_solve()

void long_difus_solve	(	int	method,
		NrnThread *	nt
	)

Definition at line 104 of file ldifus.cpp.

nonode_thread()

static void* nonode_thread ( NrnThread *  nt )

static

Definition at line 923 of file occvode.cpp.

nrn_div_capacity()

void nrn_div_capacity	(	NrnThread *	_nt,
		Memb_list *	ml
	)

Definition at line 109 of file capac.cpp.

nrn_errno_check()

int nrn_errno_check

(

int

i

)

Definition at line 837 of file fadvance.cpp.

nrn_extra_scatter_gather()

void nrn_extra_scatter_gather	(	int	direction,
		int	tid
	)

Definition at line 532 of file cvodeobj.cpp.

nrn_mul_capacity()

void nrn_mul_capacity	(	NrnThread *	_nt,
		Memb_list *	ml
	)

Definition at line 88 of file capac.cpp.

nrn_multisplit_adjust_rhs()

void nrn_multisplit_adjust_rhs

(

NrnThread *

nt

)

Definition at line 2053 of file multisplit.cpp.

nrn_multisplit_bksub()

void * nrn_multisplit_bksub

(

NrnThread *

nt

)

Definition at line 1923 of file multisplit.cpp.

nrn_multisplit_nocap_v()

void nrn_multisplit_nocap_v

(

)

Definition at line 1979 of file multisplit.cpp.

nrn_multisplit_nocap_v_part1()

void nrn_multisplit_nocap_v_part1

(

NrnThread *

nt

)

Definition at line 1984 of file multisplit.cpp.

nrn_multisplit_nocap_v_part2()

void nrn_multisplit_nocap_v_part2

(

NrnThread *

nt

)

Definition at line 1987 of file multisplit.cpp.

nrn_multisplit_nocap_v_part3()

void nrn_multisplit_nocap_v_part3

(

NrnThread *

nt

)

Definition at line 1990 of file multisplit.cpp.

nrn_multisplit_reduce_solve()

void * nrn_multisplit_reduce_solve

(

NrnThread *

nt

)

Definition at line 1917 of file multisplit.cpp.

nrn_multisplit_triang()

void * nrn_multisplit_triang

(

NrnThread *

nt

)

Definition at line 1913 of file multisplit.cpp.

nrndae_dkmap()

void nrndae_dkmap	(	double **	pv,
		double **	pvdot
	)

Definition at line 86 of file nrndae.cpp.

recalc_diam()

void recalc_diam

(

)

Definition at line 953 of file treeset.cpp.

setup_topology()

void setup_topology

(

void

)

v_setup_vectors()

void v_setup_vectors

(

)

Definition at line 1631 of file treeset.cpp.

Variable Documentation

diam_changed

int diam_changed

extern

Definition at line 23 of file cabcode.cpp.

gather_cv

Cvode* gather_cv

static

Definition at line 483 of file occvode.cpp.

gather_vec

N_Vector gather_vec

static

Definition at line 484 of file occvode.cpp.

hoc_built_in_symlist

Symlist* hoc_built_in_symlist

extern

Definition at line 76 of file ivocmac.cpp.

nonode_cv

Cvode* nonode_cv

static

Definition at line 922 of file occvode.cpp.

nrn_multisplit_setup_

void(* nrn_multisplit_setup_) () ( )

extern

Definition at line 46 of file treeset.cpp.

nrnmpi_v_transfer_

void(* nrnmpi_v_transfer_) () ( )

extern

Definition at line 152 of file fadvance.cpp.

nrnthread_v_transfer_

void(* nrnthread_v_transfer_) (NrnThread *) ( NrnThread *  nt )

extern

Definition at line 153 of file fadvance.cpp.

sp13mat

double* sp13mat

extern

vsym

Symbol* vsym

static

Definition at line 49 of file occvode.cpp.