#include <../../nrnconf.h>
#include <stdlib.h>
#include <nrnmpi.h>
#include <errno.h>
#include <time.h>
#include <InterViews/resource.h>
#include <OS/math.h>
#include <InterViews/regexp.h>
#include "classreg.h"
#include "nrnoc2iv.h"
#include "parse.hpp"
#include "cvodeobj.h"
#include "hoclist.h"
#include "pool.h"
#include "tqueue.h"
#include "ocobserv.h"
#include "nrnneosm.h"
#include "datapath.h"
#include "objcmd.h"
#include "shared/sundialsmath.h"
#include "kssingle.h"
#include "ocnotify.h"
#include "vrecitem.h"
#include "oclist.h"
#include "htlist.h"
#include "ivocvect.h"
#include "netcon.h"
#include "netcvode.h"
#include "nrncore_write/utils/nrncore_utils.h"
#include "nrnste.h"
#include "profile.h"
#include "utils/profile/profiler_interface.h"
#include <unordered_map>
#include <unordered_set>
#include "membfunc.h"
#include <hocevent.cpp>

Classes
struct	ForNetConsInfo

class	MaxStateItem

struct	InterThreadEvent

Macros
#define	USE_MIN_DELAY 1

#define	PROFILE 0

#define	lvardtloop(i, j)

#define	NVI_SUCCESS 0

#define	PP2NT(pp) ((NrnThread*) ((pp)->_vnt))

#define	PP2t(pp) (PP2NT(pp)->_t)

#define	LOCK(m)

#define	UNLOCK(m)

#define	POINT_RECEIVE(type, tar, w, f) (*pnt_receive[type])(tar, w, f)

#define	nt_dt nrn_threads->_dt

#define	nt_t nrn_threads->_t

#define	ITE_SIZE 10

#define	fifo_event event

Typedefs
typedef void(*	ReceiveFunc) (Point_process , double , double)

typedef std::vector< WatchCondition * >	WatchList

Functions
void	single_event_run ()

void	setup_topology ()

void	v_setup_vectors ()

int	nrn_errno_check (int)

void	nrn_ba (NrnThread *, int)

void	nrn_cvfun (double t, double y, double ydot)

void	nrn_cleanup_presyn (PreSyn *)

void	nrn_parent_info (Section *)

Object *	nrn_sec2cell (Section *)

int	nrn_sec2cell_equals (Section , Object )

void	net_send (void *, double , Point_process *, double, double)

void	net_move (void *, Point_process , double)

void	artcell_net_send (void *, double , Point_process *, double, double)

void	artcell_net_move (void *, Point_process , double)

void	nrn_pending_selfqueue (double tt, NrnThread *)

static void	all_pending_selfqueue (double tt)

static void *	pending_selfqueue (NrnThread *)

void	net_event (Point_process *, double)

void	_nrn_watch_activate (Datum , double()(Point_process ), int, Point_process , int, double)

void	_nrn_free_watch (Datum *d, int offset, int n)
	Called by Point_process destructor in translated mod file. More...

int	hoc_araypt (Symbol *, int)

int	hoc_stacktype ()

Point_process *	ob2pntproc (Object *)

Point_process *	ob2pntproc_0 (Object *)

void	nrn_use_daspk (int)

int	linmod_extra_eqn_count ()

int	nrn_modeltype ()

TQueue *	net_cvode_instance_event_queue (NrnThread *)

hoc_Item *	net_cvode_instance_psl ()

PlayRecList *	net_cvode_instance_prl ()

void	nrn_update_ps2nt ()

void	nrn_use_busywait (int)

double *	nrn_recalc_ptr (double *)

void *	nrn_interthread_enqueue (NrnThread *)

void	nrnthread_get_trajectory_requests (int tid, int &bsize, int &n_pr, void *&vpr, int &n_trajec, int &types, int &indices, double &pvars, double *&varrays)

void	nrnthread_trajectory_values (int tid, int n_pr, void **vpr, double t)

void	nrnthread_trajectory_return (int tid, int n_pr, int bsize, int vecsz, void **vpr, double t)

void	_nrn_free_fornetcon (void **)

double	nrn_netcon_get_delay (NetCon *nc)

void	nrn_netcon_set_delay (NetCon *nc, double d)

int	nrn_netcon_weight (NetCon nc, double *pw)

double	nrn_event_queue_stats (double *stats)

double	nrn_netcon_get_thresh (NetCon *nc)

void	nrn_netcon_set_thresh (NetCon *nc, double th)

void	nrn_netcon_event (NetCon *nc, double td)

Point_process *	nrn_netcon_target (NetCon *nc)

int	nrn_netcon_info (NetCon nc, double pw, Point_process target, double th, double *del)

int	nrn_presyn_count (PreSyn *ps)

void *	nrn_presyn_netcon (PreSyn *ps, int i)

void	ncs2nrn_integrate (double tstop)

void	nrn_fixed_step ()

void	nrn_fixed_step_group (int)

static void	allthread_handle_callback ()

static Node *	node (Object *)

	declarePool (SelfEventPool, SelfEvent) implementPool(SelfEventPool

static double	nc_preloc (void *v)

static Object **	nc_preseg (void *v)

static double	nc_postloc (void *v)

static Object **	nc_postseg (void *v)

static Object **	nc_syn (void *v)

static Object **	nc_pre (void *v)

static Object **	newoclist (int i, OcList *&o)

static Object **	nc_prelist (void *v)

static Object **	nc_synlist (void *v)

static Object **	nc_postcelllist (void *v)

static Object **	nc_precelllist (void *v)

static Object **	nc_precell (void *v)

static Object **	nc_postcell (void *v)

static double	nc_setpost (void *v)

static double	nc_valid (void *v)

static double	nc_active (void *v)

static double	nc_event (void *v)

static double	nc_record (void *v)

static double	nc_srcgid (void *v)

static Object **	nc_get_recordvec (void *v)

static double	nc_wcnt (void *v)

static void	steer_val (void *v)

static void *	cons (Object *o)

static void	destruct (void *v)

void	NetCon_reg ()

static char *	escape_bracket (const char *s)

void	_nrn_watch_allocate (Datum d, double(c)(Point_process ), int i, Point_process pnt, double flag)
	Introduced so corenrn->nrn can request the mod file to make sure all WatchCondition are allocated. More...

void	nrn_watch_clear ()
	Watch info corenrn->nrn transfer requires all activated WatchCondition be deactivated prior to mirroring the activation that exists on the corenrn side. More...

static void	peq (const TQItem *, int)

static void	event_info_callback (const TQItem *, int)

int	_nrn_netcon_args (void v, double **argslist)

void	record_init_clear (const TQItem *q, int)

double	nrn_hoc2fixed_step (void *)

double	nrn_hoc2fun (void *v)

double	nrn_hoc2scatter_y (void *v)

double	nrn_hoc2gather_y (void *v)

static void *	eval_cond (NrnThread *nt)

static void *	chk_deliv (NrnThread *nt)

static int	trajec_buffered (NrnThread &nt, int bsize, IvocVect v, double pd, int i_pr, PlayRecord pr, void vpr, int i_trajec, int types, int indices, double pvars, double *varrays)

void	nrn2core_transfer_WatchCondition (WatchCondition wc, void(cb)(int, int, int, int, int))
	In nrncore_callbacks.cpp. More...

void	nrn2core_transfer_WATCH (void(*cb)(int, int, int, int, int))

	implementPtrList (PlayRecList, PlayRecord) void NetCvode

static void *	lvardt_integrate (NrnThread *nt)

static void *	deliver_for_thread (NrnThread *nt)

Variables
SelfEvent typedef std::vector< TQItem * >	TQList

int	structure_change_cnt

int	v_structure_change

int	tree_changed

int	nrn_matrix_cnt_

int	diam_changed

int	cvode_active_

NetCvode *	net_cvode_instance

cTemplate **	nrn_pnt_template_

double	t

double	dt

ReceiveFunc *	pnt_receive

ReceiveFunc *	pnt_receive_init

short *	pnt_receive_size

short *	nrn_is_artificial_

short *	nrn_artcell_qindex_

int	nrn_use_selfqueue_

int	nrn_use_daspk_

Symlist *	hoc_built_in_symlist

Symlist *	hoc_top_level_symlist

void(*	nrnthread_v_transfer_ )(NrnThread *)

Object (	nrnpy_seg_from_sec_x )(Section *, double)

bool	nrn_trajectory_request_per_time_step_ = false

int	hoc_return_type_code

int	nrn_fornetcon_cnt_

int *	nrn_fornetcon_index_

int *	nrn_fornetcon_type_

void(*	nrn_allthread_handle )()

bool	nrn_use_fifo_queue_

bool	nrn_use_bin_queue_

static unsigned long	deliver_cnt_

static unsigned long	net_event_cnt_

static TQList *	record_init_items_

static DiscreteEvent *	null_event_

static PreSyn *	unused_presyn

static Member_func	members []

static Member_ret_obj_func	omembers []

static IvocVect *	peqvec

static int	event_info_type_

static IvocVect *	event_info_tvec_

static IvocVect *	event_info_flagvec_

static OcList *	event_info_list_

static double	pending_selfqueue_deliver_

static Cvode *	eval_cv

static double	lvardt_tout_

Macro Definition Documentation

◆ fifo_event

#define fifo_event event

Definition at line 2681 of file netcvode.cpp.

◆ ITE_SIZE

#define ITE_SIZE 10

Definition at line 1110 of file netcvode.cpp.

◆ LOCK

#define LOCK ( m )

Definition at line 55 of file netcvode.cpp.

◆ lvardtloop

#define lvardtloop	(	i,
		j
	)

Value:

for (i = 0; i < nrn_nthread; ++i) \

for (j = 0; j < p[i].nlcv_; ++j)

i

#define i

Definition: md1redef.h:12

nrn_nthread

int nrn_nthread

Definition: multicore.cpp:46

p

size_t p

Definition: nrngsl_hc_radix2.cpp:49

j

size_t j

Definition: nrngsl_real_radix2.cpp:50

Definition at line 48 of file netcvode.cpp.

◆ nt_dt

#define nt_dt nrn_threads->_dt

Definition at line 79 of file netcvode.cpp.

◆ nt_t

#define nt_t nrn_threads->_t

Definition at line 80 of file netcvode.cpp.

◆ NVI_SUCCESS

#define NVI_SUCCESS 0

Definition at line 52 of file netcvode.cpp.

◆ POINT_RECEIVE

#define POINT_RECEIVE	(	type,
		tar,
		w,
		f
	)	(*pnt_receive[type])(tar, w, f)

Definition at line 59 of file netcvode.cpp.

◆ PP2NT

#define PP2NT ( pp ) ((NrnThread*) ((pp)->_vnt))

Definition at line 53 of file netcvode.cpp.

◆ PP2t

#define PP2t ( pp ) (PP2NT(pp)->_t)

Definition at line 54 of file netcvode.cpp.

◆ PROFILE

#define PROFILE 0

Definition at line 34 of file netcvode.cpp.

◆ UNLOCK

#define UNLOCK ( m )

Definition at line 56 of file netcvode.cpp.

◆ USE_MIN_DELAY

#define USE_MIN_DELAY 1

Definition at line 4 of file netcvode.cpp.

Typedef Documentation

◆ ReceiveFunc

typedef void(* ReceiveFunc) (Point_process *, double *, double)

Definition at line 46 of file netcvode.cpp.

◆ WatchList

typedef std::vector<WatchCondition*> WatchList

Definition at line 454 of file netcvode.cpp.

Function Documentation

◆ _nrn_free_fornetcon()

void _nrn_free_fornetcon ( void ** v )

Definition at line 4243 of file netcvode.cpp.

◆ _nrn_free_watch()

void _nrn_free_watch	(	Datum *	d,
		int	offset,
		int	n
	)

Called by Point_process destructor in translated mod file.

Definition at line 2633 of file netcvode.cpp.

◆ _nrn_netcon_args()

int _nrn_netcon_args	(	void *	v,
		double ***	argslist
	)

Definition at line 4236 of file netcvode.cpp.

◆ _nrn_watch_activate()

void _nrn_watch_activate	(	Datum *	d,
		double()(Point_process )	c,
		int	i,
		Point_process *	pnt,
		int	r,
		double	flag
	)

Definition at line 2507 of file netcvode.cpp.

◆ _nrn_watch_allocate()

void _nrn_watch_allocate	(	Datum *	d,
		double()(Point_process )	c,
		int	i,
		Point_process *	pnt,
		double	flag
	)

Introduced so corenrn->nrn can request the mod file to make sure all WatchCondition are allocated.

When that is the case then corenrn can call nrn_watch_activate with all args filled out because the allocated WatchCondition has double (*c)(Point_process) and flag_ filled in.

Definition at line 2594 of file netcvode.cpp.

◆ all_pending_selfqueue()

static void all_pending_selfqueue ( double tt )

static

Definition at line 3916 of file netcvode.cpp.

◆ allthread_handle_callback()

static void allthread_handle_callback ( )

static

Definition at line 221 of file netcvode.cpp.

◆ artcell_net_move()

void artcell_net_move	(	void **	v,
		Point_process *	pnt,
		double	tt
	)

Definition at line 2350 of file netcvode.cpp.

◆ artcell_net_send()

void artcell_net_send	(	void **	v,
		double *	weight,
		Point_process *	pnt,
		double	td,
		double	flag
	)

Definition at line 2446 of file netcvode.cpp.

◆ chk_deliv()

static void* chk_deliv ( NrnThread * nt )

static

Definition at line 5685 of file netcvode.cpp.

◆ cons()

static void* cons ( Object * o )

static

Definition at line 855 of file netcvode.cpp.

◆ declarePool()

declarePool	(	SelfEventPool	,
		SelfEvent
	)

◆ deliver_for_thread()

static void* deliver_for_thread ( NrnThread * nt )

static

Definition at line 7002 of file netcvode.cpp.

◆ destruct()

static void destruct ( void * v )

static

Definition at line 891 of file netcvode.cpp.

◆ escape_bracket()

static char* escape_bracket ( const char * s )

static

Definition at line 919 of file netcvode.cpp.

◆ eval_cond()

static void* eval_cond ( NrnThread * nt )

static

Definition at line 5656 of file netcvode.cpp.

◆ event_info_callback()

static void event_info_callback	(	const TQItem *	q,
		int
	)

static

Definition at line 3097 of file netcvode.cpp.

◆ hoc_araypt()

int hoc_araypt	(	Symbol *	,
		int
	)

◆ hoc_stacktype()

int hoc_stacktype ( )

Definition at line 731 of file code.cpp.

◆ implementPtrList()

implementPtrList	(	PlayRecList	,
		PlayRecord
	)

Definition at line 6238 of file netcvode.cpp.

◆ linmod_extra_eqn_count()

int linmod_extra_eqn_count ( )

◆ lvardt_integrate()

static void* lvardt_integrate ( NrnThread * nt )

static

Definition at line 6883 of file netcvode.cpp.

◆ nc_active()

static double nc_active ( void * v )

static

Definition at line 716 of file netcvode.cpp.

◆ nc_event()

static double nc_event ( void * v )

static

Definition at line 729 of file netcvode.cpp.

◆ nc_get_recordvec()

static Object** nc_get_recordvec ( void * v )

static

Definition at line 784 of file netcvode.cpp.

◆ nc_postcell()

static Object** nc_postcell ( void * v )

static

Definition at line 661 of file netcvode.cpp.

◆ nc_postcelllist()

static Object** nc_postcelllist ( void * v )

static

Definition at line 610 of file netcvode.cpp.

◆ nc_postloc()

static double nc_postloc ( void * v )

static

Definition at line 525 of file netcvode.cpp.

◆ nc_postseg()

static Object** nc_postseg ( void * v )

static

Definition at line 535 of file netcvode.cpp.

◆ nc_pre()

static Object** nc_pre ( void * v )

static

Definition at line 555 of file netcvode.cpp.

◆ nc_precell()

static Object** nc_precell ( void * v )

static

Definition at line 652 of file netcvode.cpp.

◆ nc_precelllist()

static Object** nc_precelllist ( void * v )

static

Definition at line 631 of file netcvode.cpp.

◆ nc_prelist()

static Object** nc_prelist ( void * v )

static

Definition at line 579 of file netcvode.cpp.

◆ nc_preloc()

static double nc_preloc ( void * v )

static

Definition at line 466 of file netcvode.cpp.

◆ nc_preseg()

static Object** nc_preseg ( void * v )

static

Definition at line 493 of file netcvode.cpp.

◆ nc_record()

static double nc_record ( void * v )

static

Definition at line 752 of file netcvode.cpp.

◆ nc_setpost()

static double nc_setpost ( void * v )

static

Definition at line 670 of file netcvode.cpp.

◆ nc_srcgid()

static double nc_srcgid ( void * v )

static

Definition at line 775 of file netcvode.cpp.

◆ nc_syn()

static Object** nc_syn ( void * v )

static

Definition at line 546 of file netcvode.cpp.

◆ nc_synlist()

static Object** nc_synlist ( void * v )

static

Definition at line 593 of file netcvode.cpp.

◆ nc_valid()

static double nc_valid ( void * v )

static

Definition at line 707 of file netcvode.cpp.

◆ nc_wcnt()

static double nc_wcnt ( void * v )

static

Definition at line 793 of file netcvode.cpp.

◆ ncs2nrn_integrate()

void ncs2nrn_integrate ( double tstop )

Definition at line 3832 of file netcvode.cpp.

◆ net_cvode_instance_event_queue()

TQueue * net_cvode_instance_event_queue ( NrnThread * nt )

Definition at line 319 of file netcvode.cpp.

◆ net_cvode_instance_prl()

PlayRecList * net_cvode_instance_prl ( )

Definition at line 327 of file netcvode.cpp.

◆ net_cvode_instance_psl()

hoc_Item * net_cvode_instance_psl ( )

Definition at line 323 of file netcvode.cpp.

◆ net_event()

void net_event	(	Point_process *	pnt,
		double	time
	)

Definition at line 2485 of file netcvode.cpp.

◆ net_move()

void net_move	(	void **	v,
		Point_process *	pnt,
		double	tt
	)

Definition at line 2333 of file netcvode.cpp.

◆ net_send()

void net_send	(	void **	v,
		double *	weight,
		Point_process *	pnt,
		double	td,
		double	flag
	)

Definition at line 2411 of file netcvode.cpp.

◆ NetCon_reg()

void NetCon_reg ( )

Definition at line 896 of file netcvode.cpp.

◆ newoclist()

static Object** newoclist	(	int	i,
		OcList *&	o
	)

static

Definition at line 564 of file netcvode.cpp.

◆ node()

Node * node ( Object * ob )

static

Definition at line 340 of file netcvode.cpp.

◆ nrn2core_transfer_WATCH()

void nrn2core_transfer_WATCH ( void(*)(int, int, int, int, int) cb )

Definition at line 6161 of file netcvode.cpp.

◆ nrn2core_transfer_WatchCondition()

void nrn2core_transfer_WatchCondition	(	WatchCondition *	wc,
		void(*)(int, int, int, int, int)	cb
	)

In nrncore_callbacks.cpp.

Definition at line 740 of file nrncore_callbacks.cpp.

◆ nrn_ba()

void nrn_ba	(	NrnThread *	nt,
		int	bat
	)

Definition at line 1104 of file fadvance.cpp.

◆ nrn_cleanup_presyn()

void nrn_cleanup_presyn ( PreSyn * ps )

Definition at line 976 of file netpar.cpp.

◆ nrn_cvfun()

void nrn_cvfun	(	double	t,
		double *	y,
		double *	ydot
	)

Definition at line 4359 of file netcvode.cpp.

◆ nrn_errno_check()

int nrn_errno_check ( int i )

Definition at line 837 of file fadvance.cpp.

◆ nrn_fixed_step()

void nrn_fixed_step ( )

Definition at line 352 of file fadvance.cpp.

◆ nrn_fixed_step_group()

void nrn_fixed_step_group ( int n )

Definition at line 408 of file fadvance.cpp.

◆ nrn_hoc2fixed_step()

double nrn_hoc2fixed_step ( void * v )

Definition at line 4364 of file netcvode.cpp.

◆ nrn_hoc2fun()

double nrn_hoc2fun ( void * v )

Definition at line 4369 of file netcvode.cpp.

◆ nrn_hoc2gather_y()

double nrn_hoc2gather_y ( void * v )

Definition at line 4404 of file netcvode.cpp.

◆ nrn_hoc2scatter_y()

double nrn_hoc2scatter_y ( void * v )

Definition at line 4388 of file netcvode.cpp.

◆ nrn_interthread_enqueue()

void * nrn_interthread_enqueue ( NrnThread * nt )

Definition at line 7051 of file netcvode.cpp.

◆ nrn_modeltype()

int nrn_modeltype ( )

Definition at line 1949 of file treeset.cpp.

◆ nrn_netcon_event()

void nrn_netcon_event	(	NetCon *	nc,
		double	td
	)

Definition at line 185 of file netcvode.cpp.

◆ nrn_netcon_get_delay()

double nrn_netcon_get_delay ( NetCon * nc )

Definition at line 154 of file netcvode.cpp.

◆ nrn_netcon_get_thresh()

double nrn_netcon_get_thresh ( NetCon * nc )

Definition at line 172 of file netcvode.cpp.

◆ nrn_netcon_info()

int nrn_netcon_info	(	NetCon *	nc,
		double **	pw,
		Point_process **	target,
		double **	th,
		double **	del
	)

Definition at line 195 of file netcvode.cpp.

◆ nrn_netcon_set_delay()

void nrn_netcon_set_delay	(	NetCon *	nc,
		double	d
	)

Definition at line 157 of file netcvode.cpp.

◆ nrn_netcon_set_thresh()

void nrn_netcon_set_thresh	(	NetCon *	nc,
		double	th
	)

Definition at line 179 of file netcvode.cpp.

◆ nrn_netcon_target()

Point_process* nrn_netcon_target ( NetCon * nc )

Definition at line 190 of file netcvode.cpp.

◆ nrn_netcon_weight()

int nrn_netcon_weight	(	NetCon *	nc,
		double **	pw
	)

Definition at line 160 of file netcvode.cpp.

◆ nrn_parent_info()

void nrn_parent_info ( Section * s )

Definition at line 1678 of file cabcode.cpp.

◆ nrn_pending_selfqueue()

void nrn_pending_selfqueue	(	double	tt,
		NrnThread *	nt
	)

Definition at line 3890 of file netcvode.cpp.

◆ nrn_presyn_count()

int nrn_presyn_count ( PreSyn * ps )

Definition at line 203 of file netcvode.cpp.

◆ nrn_presyn_netcon()

void* nrn_presyn_netcon	(	PreSyn *	ps,
		int	i
	)

Definition at line 206 of file netcvode.cpp.

◆ nrn_recalc_ptr()

double* nrn_recalc_ptr ( double * old )

Definition at line 2179 of file treeset.cpp.

◆ nrn_sec2cell()

Object* nrn_sec2cell ( Section * sec )

Definition at line 233 of file cabcode.cpp.

◆ nrn_sec2cell_equals()

int nrn_sec2cell_equals	(	Section *	sec,
		Object *	obj
	)

Definition at line 248 of file cabcode.cpp.

◆ nrn_update_ps2nt()

void nrn_update_ps2nt ( void )

Definition at line 5007 of file netcvode.cpp.

◆ nrn_use_busywait()

void nrn_use_busywait ( int b )

Definition at line 1287 of file multicore.cpp.

◆ nrn_use_daspk()

void nrn_use_daspk ( int b )

Definition at line 331 of file netcvode.cpp.

◆ nrn_watch_clear()

void nrn_watch_clear ( )

Watch info corenrn->nrn transfer requires all activated WatchCondition be deactivated prior to mirroring the activation that exists on the corenrn side.

Definition at line 2620 of file netcvode.cpp.

◆ nrnthread_get_trajectory_requests()

void nrnthread_get_trajectory_requests	(	int	tid,
		int &	bsize,
		int &	n_pr,
		void **&	vpr,
		int &	n_trajec,
		int *&	types,
		int *&	indices,
		double **&	pvars,
		double **&	varrays
	)

Definition at line 5801 of file netcvode.cpp.

◆ nrnthread_trajectory_return()

void nrnthread_trajectory_return	(	int	tid,
		int	n_pr,
		int	bsize,
		int	vecsz,
		void **	vpr,
		double	t
	)

Definition at line 6097 of file netcvode.cpp.

◆ nrnthread_trajectory_values()

void nrnthread_trajectory_values	(	int	tid,
		int	n_pr,
		void **	vpr,
		double	t
	)

Definition at line 6054 of file netcvode.cpp.

◆ ob2pntproc()

Point_process* ob2pntproc ( Object * ob )

Definition at line 88 of file hocmech.cpp.

◆ ob2pntproc_0()

Point_process* ob2pntproc_0 ( Object * ob )

Definition at line 78 of file hocmech.cpp.

◆ pending_selfqueue()

static void * pending_selfqueue ( NrnThread * nt )

static

Definition at line 3885 of file netcvode.cpp.

◆ peq()

static void peq	(	const TQItem *	q,
		int
	)

static

Definition at line 3071 of file netcvode.cpp.

◆ record_init_clear()

void record_init_clear	(	const TQItem *	q,
		int
	)

Definition at line 4254 of file netcvode.cpp.

◆ setup_topology()

void setup_topology ( void )

◆ single_event_run()

void single_event_run ( )

◆ steer_val()

static void steer_val ( void * v )

static

Definition at line 826 of file netcvode.cpp.

◆ trajec_buffered()

static int trajec_buffered	(	NrnThread &	nt,
		int	bsize,
		IvocVect *	v,
		double *	pd,
		int	i_pr,
		PlayRecord *	pr,
		void **	vpr,
		int	i_trajec,
		int *	types,
		int *	indices,
		double **	pvars,
		double **	varrays
	)

static

Definition at line 5746 of file netcvode.cpp.

◆ v_setup_vectors()

void v_setup_vectors ( )

Definition at line 1631 of file treeset.cpp.

Variable Documentation

◆ cvode_active_

int cvode_active_

extern

Definition at line 163 of file fadvance.cpp.

◆ deliver_cnt_

unsigned long deliver_cnt_

static

Definition at line 287 of file netcvode.cpp.

◆ diam_changed

int diam_changed

extern

Definition at line 23 of file cabcode.cpp.

◆ dt

double dt

Definition at line 76 of file netcvode.cpp.

◆ eval_cv

Cvode* eval_cv

static

Definition at line 5655 of file netcvode.cpp.

◆ event_info_flagvec_

IvocVect* event_info_flagvec_

static

Definition at line 3093 of file netcvode.cpp.

◆ event_info_list_

OcList* event_info_list_

static

Definition at line 3094 of file netcvode.cpp.

◆ event_info_tvec_

IvocVect* event_info_tvec_

static

Definition at line 3092 of file netcvode.cpp.

◆ event_info_type_

int event_info_type_

static

Definition at line 3091 of file netcvode.cpp.

◆ hoc_built_in_symlist

Symlist* hoc_built_in_symlist

extern

Definition at line 76 of file ivocmac.cpp.

◆ hoc_return_type_code

int hoc_return_type_code

extern

Definition at line 42 of file code.cpp.

◆ hoc_top_level_symlist

Symlist* hoc_top_level_symlist

extern

Definition at line 23 of file symdir.cpp.

◆ lvardt_tout_

double lvardt_tout_

static

Definition at line 6881 of file netcvode.cpp.

◆ members

Member_func members[]

static

Initial value:

= {{"active", nc_active},
                                {"valid", nc_valid},
                                {"preloc", nc_preloc},
                                {"postloc", nc_postloc},
                                {"setpost", nc_setpost},
                                {"event", nc_event},
                                {"record", nc_record},
                                {"srcgid", nc_srcgid},
                                {"wcnt", nc_wcnt},
                                {"delay", 0},  
                                {"weight", 0},
                                {"threshold", 0},
                                {"x", 0},
                                {0, 0}}

Definition at line 798 of file netcvode.cpp.

◆ net_cvode_instance

NetCvode* net_cvode_instance

extern

Definition at line 27 of file cvodestb.cpp.

◆ net_event_cnt_

unsigned long net_event_cnt_

static

Definition at line 287 of file netcvode.cpp.

◆ nrn_allthread_handle

void(* nrn_allthread_handle) () ( )

extern

Definition at line 69 of file fadvance.cpp.

◆ nrn_artcell_qindex_

short* nrn_artcell_qindex_

extern

Definition at line 194 of file init.cpp.

◆ nrn_fornetcon_cnt_

int nrn_fornetcon_cnt_

extern

Definition at line 180 of file init.cpp.

◆ nrn_fornetcon_index_

int* nrn_fornetcon_index_

extern

Definition at line 182 of file init.cpp.

◆ nrn_fornetcon_type_

int* nrn_fornetcon_type_

extern

Definition at line 181 of file init.cpp.

◆ nrn_is_artificial_

short* nrn_is_artificial_

extern

Definition at line 193 of file init.cpp.

◆ nrn_matrix_cnt_

int nrn_matrix_cnt_

Definition at line 69 of file netcvode.cpp.

◆ nrn_pnt_template_

cTemplate** nrn_pnt_template_

extern

Definition at line 131 of file init.cpp.

◆ nrn_trajectory_request_per_time_step_

bool nrn_trajectory_request_per_time_step_ = false

Definition at line 140 of file netcvode.cpp.

◆ nrn_use_bin_queue_

bool nrn_use_bin_queue_

Definition at line 273 of file netcvode.cpp.

◆ nrn_use_daspk_

int nrn_use_daspk_

extern

Definition at line 72 of file treeset.cpp.

◆ nrn_use_fifo_queue_

bool nrn_use_fifo_queue_

Definition at line 270 of file netcvode.cpp.

◆ nrn_use_selfqueue_

int nrn_use_selfqueue_

Definition at line 93 of file netcvode.cpp.

◆ nrnpy_seg_from_sec_x

Object( nrnpy_seg_from_sec_x) (Section *, double)	(	Section *	,
		double	x
	)

Definition at line 123 of file netcvode.cpp.

◆ nrnthread_v_transfer_

void(* nrnthread_v_transfer_) (NrnThread *) ( NrnThread * nt )

extern

Definition at line 153 of file fadvance.cpp.

◆ null_event_

DiscreteEvent* null_event_

static

Definition at line 462 of file netcvode.cpp.

◆ omembers

Member_ret_obj_func omembers[]

static

Initial value:

= {{"syn", nc_syn},
                                         {"pre", nc_pre},
                                         {"precell", nc_precell},
                                         {"postcell", nc_postcell},
                                         {"preseg", nc_preseg},
                                         {"postseg", nc_postseg},
                                         {"prelist", nc_prelist},
                                         {"synlist", nc_synlist},
                                         {"precelllist", nc_precelllist},
                                         {"postcelllist", nc_postcelllist},
                                         {"get_recordvec", nc_get_recordvec},
                                         {0, 0}}

Definition at line 813 of file netcvode.cpp.

◆ pending_selfqueue_deliver_

double pending_selfqueue_deliver_

static

Definition at line 3884 of file netcvode.cpp.

◆ peqvec

IvocVect* peqvec

static

Definition at line 3069 of file netcvode.cpp.

◆ pnt_receive

ReceiveFunc* pnt_receive

extern

Definition at line 133 of file init.cpp.

◆ pnt_receive_init

ReceiveFunc* pnt_receive_init

extern

Definition at line 134 of file init.cpp.

◆ pnt_receive_size

short* pnt_receive_size

extern

Definition at line 135 of file init.cpp.

◆ record_init_items_

TQList* record_init_items_

static

Definition at line 460 of file netcvode.cpp.

◆ structure_change_cnt

int structure_change_cnt

Definition at line 67 of file netcvode.cpp.

◆ t

double t

extern

Definition at line 59 of file cvodeobj.cpp.

◆ TQList

SelfEvent typedef std::vector<TQItem*> TQList

Definition at line 456 of file netcvode.cpp.

◆ tree_changed

int tree_changed

extern

Definition at line 26 of file nrncore_utils.cpp.

◆ unused_presyn

PreSyn* unused_presyn

static

Definition at line 464 of file netcvode.cpp.

◆ v_structure_change

int v_structure_change

extern

Definition at line 99 of file cvodestb.cpp.

Classes

Macros

Typedefs

Functions

Variables

Macro Definition Documentation

◆ fifo_event

◆ ITE_SIZE

◆ LOCK

◆ lvardtloop

◆ nt_dt

◆ nt_t

◆ NVI_SUCCESS

◆ POINT_RECEIVE

◆ PP2NT

◆ PP2t

◆ PROFILE

◆ UNLOCK

◆ USE_MIN_DELAY

Typedef Documentation

◆ ReceiveFunc

◆ WatchList

Function Documentation

◆ _nrn_free_fornetcon()

◆ _nrn_free_watch()

◆ _nrn_netcon_args()

◆ _nrn_watch_activate()

◆ _nrn_watch_allocate()

◆ all_pending_selfqueue()

◆ allthread_handle_callback()

◆ artcell_net_move()

◆ artcell_net_send()

◆ chk_deliv()

◆ cons()

◆ declarePool()

◆ deliver_for_thread()

◆ destruct()

◆ escape_bracket()

◆ eval_cond()

◆ event_info_callback()

◆ hoc_araypt()

◆ hoc_stacktype()

◆ implementPtrList()

◆ linmod_extra_eqn_count()

◆ lvardt_integrate()

◆ nc_active()

◆ nc_event()

◆ nc_get_recordvec()

◆ nc_postcell()

◆ nc_postcelllist()

◆ nc_postloc()

◆ nc_postseg()

◆ nc_pre()

◆ nc_precell()

◆ nc_precelllist()

◆ nc_prelist()

◆ nc_preloc()

◆ nc_preseg()

◆ nc_record()

◆ nc_setpost()

◆ nc_srcgid()

◆ nc_syn()

◆ nc_synlist()

◆ nc_valid()

◆ nc_wcnt()

◆ ncs2nrn_integrate()

◆ net_cvode_instance_event_queue()

◆ net_cvode_instance_prl()

◆ net_cvode_instance_psl()

◆ net_event()

◆ net_move()

◆ net_send()

◆ NetCon_reg()

◆ newoclist()

◆ node()

◆ nrn2core_transfer_WATCH()

◆ nrn2core_transfer_WatchCondition()

◆ nrn_ba()

◆ nrn_cleanup_presyn()

◆ nrn_cvfun()