#include <../../nrnconf.h>
#include <stdlib.h>
#include "section.h"
#include "neuron.h"
#include "membfunc.h"
#include "parse.hpp"
#include "membdef.h"
#include "nrniv_mf.h"
#include "nrnunits_modern.h"

Macros
#define	nparm 5

#define	global_conci(type) ion_global_map[type][0]

#define	global_conco(type) ion_global_map[type][1]

#define	global_charge(type) ion_global_map[type][2]

#define	VAL_SENTINAL -10000.

#define	FARADAY _faraday_[_nrnunit_use_legacy_]

#define	gasconstant _gasconstant_[_nrnunit_use_legacy_]

#define	ktf (1000. * gasconstant * (celsius + 273.15) / FARADAY)

#define	erev pd[i][0] /* From Eion */

#define	conci pd[i][1]

#define	conco pd[i][2]

#define	cur pd[i][3]

#define	dcurdv pd[i][4]

#define	iontype ppd[i][0].i /* how _AMBIGUOUS is to be handled */

#define	charge global_charge(type)

#define	conci0 global_conci(type)

#define	conco0 global_conco(type)

#define	c 3

#define	dc 4

Functions
double	chkarg (int, double low, double high)

Section *	nrn_noerr_access ()

void	hoc_register_prop_size (int, int, int)

static void	ion_alloc (Prop *)

static void	ion_cur (NrnThread , Memb_list , int)

static void	ion_init (NrnThread , Memb_list , int)

double	nrn_nernst (double, double, double)

double	nrn_ghk (double, double, double, double)

int	nrn_is_ion (int type)

double	nrn_ion_charge (Symbol *sym)

void	ion_register (void)

void	ion_charge (void)

void	register_mech (const char **, Pvmp, Pvmi, Pvmi, Pvmi, Pvmi, int, int)

void	ion_reg (const char *name, double valence)

void	nrn_verify_ion_charge_defined ()

void	nrn_wrote_conc (Symbol sym, double pe, int it)

void	nernst (void)

static double	efun (double x)

void	ghk (void)

double	nrn_nernst_coef (int type)

void	nrn_check_conc_write (Prop p_ok, Prop pion, int i)

void	ion_style (void)

int	nrn_vartype (Symbol *sym)

void	nrn_promote (Prop *p, int conc, int rev)

void	second_order_cur (NrnThread *nt)

Variables
static const char *	mechanism []

static DoubScal	scdoub []

static int	na_ion

static int	k_ion

static int	ca_ion

static int	ion_global_map_size

static double **	ion_global_map

static double	_faraday_ [2] = {_faraday_codata2018, 96485.309}

static double	_gasconstant_ [2] = {_gasconstant_codata2018, 8.3134}

Macro Definition Documentation

◆ c

#define c 3

◆ charge

#define charge global_charge(type)

Definition at line 393 of file eion.cpp.

◆ conci

#define conci pd[i][1]

Definition at line 362 of file eion.cpp.

◆ conci0

#define conci0 global_conci(type)

Definition at line 394 of file eion.cpp.

◆ conco

#define conco pd[i][2]

Definition at line 363 of file eion.cpp.

◆ conco0

#define conco0 global_conco(type)

Definition at line 395 of file eion.cpp.

◆ cur

#define cur pd[i][3]

Definition at line 364 of file eion.cpp.

◆ dc

#define dc 4

◆ dcurdv

#define dcurdv pd[i][4]

Definition at line 365 of file eion.cpp.

◆ erev

#define erev pd[i][0] /* From Eion */

Definition at line 361 of file eion.cpp.

◆ FARADAY

#define FARADAY _faraday_[_nrnunit_use_legacy_]

Definition at line 271 of file eion.cpp.

◆ gasconstant

#define gasconstant _gasconstant_[_nrnunit_use_legacy_]

Definition at line 273 of file eion.cpp.

◆ global_charge

#define global_charge ( type ) ion_global_map[type][2]

Definition at line 59 of file eion.cpp.

◆ global_conci

#define global_conci ( type ) ion_global_map[type][0]

Definition at line 57 of file eion.cpp.

◆ global_conco

#define global_conco ( type ) ion_global_map[type][1]

Definition at line 58 of file eion.cpp.

◆ iontype

#define iontype ppd[i][0].i /* how _AMBIGUOUS is to be handled */

Definition at line 382 of file eion.cpp.

◆ ktf

#define ktf (1000. * gasconstant * (celsius + 273.15) / FARADAY)

Definition at line 276 of file eion.cpp.

◆ nparm

#define nparm 5

Definition at line 21 of file eion.cpp.

◆ VAL_SENTINAL

#define VAL_SENTINAL -10000.

Function Documentation

◆ chkarg()

double chkarg	(	int	arg,
		double	low,
		double	high
	)

Definition at line 638 of file code2.cpp.

◆ efun()

static double efun ( double x )

static

Definition at line 339 of file eion.cpp.

◆ ghk()

void ghk ( void )

Definition at line 355 of file eion.cpp.

◆ hoc_register_prop_size()

void hoc_register_prop_size	(	int	type,
		int	psize,
		int	dpsize
	)

Definition at line 704 of file init.cpp.

◆ ion_alloc()

static void ion_alloc ( Prop * p )

static

Definition at line 617 of file eion.cpp.

◆ ion_charge()

void ion_charge ( void )

Definition at line 141 of file eion.cpp.

◆ ion_cur()

static void ion_cur	(	NrnThread *	nt,
		Memb_list *	ml,
		int	type
	)

static

Definition at line 569 of file eion.cpp.

◆ ion_init()

static void ion_init	(	NrnThread *	nt,
		Memb_list *	ml,
		int	type
	)

static

Definition at line 591 of file eion.cpp.

◆ ion_reg()

void ion_reg	(	const char *	name,
		double	valence
	)

Definition at line 154 of file eion.cpp.

◆ ion_register()

void ion_register ( void )

Definition at line 65 of file eion.cpp.

◆ ion_style()

void ion_style ( void )

Definition at line 464 of file eion.cpp.

◆ nernst()

void nernst ( void )

Definition at line 297 of file eion.cpp.

◆ nrn_check_conc_write()

void nrn_check_conc_write	(	Prop *	p_ok,
		Prop *	pion,
		int	i
	)

Definition at line 405 of file eion.cpp.

◆ nrn_ghk()

double nrn_ghk	(	double	v,
		double	ci,
		double	co,
		double	z
	)

Definition at line 347 of file eion.cpp.

◆ nrn_ion_charge()

double nrn_ion_charge ( Symbol * sym )

Definition at line 61 of file eion.cpp.

◆ nrn_is_ion()

int nrn_is_ion ( int type )

Definition at line 51 of file eion.cpp.

◆ nrn_nernst()

double nrn_nernst	(	double	ci,
		double	co,
		double	z
	)

Definition at line 277 of file eion.cpp.

◆ nrn_nernst_coef()

double nrn_nernst_coef ( int type )

Definition at line 397 of file eion.cpp.

◆ nrn_noerr_access()

Section* nrn_noerr_access ( )

Definition at line 472 of file cabcode.cpp.

◆ nrn_promote()

void nrn_promote	(	Prop *	p,
		int	conc,
		int	rev
	)

Definition at line 539 of file eion.cpp.

◆ nrn_vartype()

int nrn_vartype ( Symbol * sym )

Definition at line 515 of file eion.cpp.

◆ nrn_verify_ion_charge_defined()

void nrn_verify_ion_charge_defined ( )

Definition at line 256 of file eion.cpp.

◆ nrn_wrote_conc()

void nrn_wrote_conc	(	Symbol *	sym,
		double *	pe,
		int	it
	)

Definition at line 291 of file eion.cpp.

◆ register_mech()

void register_mech	(	const char **	m,
		Pvmp	alloc,
		Pvmi	cur,
		Pvmi	jacob,
		Pvmi	stat,
		Pvmi	initialize,
		int	nrnpointerindex,
		int	vectorized
	)

Definition at line 674 of file init.cpp.

◆ second_order_cur()

void second_order_cur ( NrnThread * nt )

Definition at line 649 of file eion.cpp.

Variable Documentation

◆ _faraday_

double _faraday_[2] = {_faraday_codata2018, 96485.309}

static

Definition at line 272 of file eion.cpp.

◆ _gasconstant_

double _gasconstant_[2] = {_gasconstant_codata2018, 8.3134}

static

Definition at line 274 of file eion.cpp.

◆ ca_ion

int ca_ion

static

Definition at line 49 of file eion.cpp.

◆ ion_global_map

double** ion_global_map

static

Definition at line 56 of file eion.cpp.

◆ ion_global_map_size

int ion_global_map_size

static

Definition at line 55 of file eion.cpp.

◆ k_ion

int k_ion

static

Definition at line 49 of file eion.cpp.

◆ mechanism

const char* mechanism[]

static

Initial value:

= {
                                  "0",
                                  "na_ion",
                                  "ena",
                                  "nao",
                                  "nai",
                                  0,
                                  "ina",
                                  "dina_dv_",
                                  0,
                                  0}

Definition at line 22 of file eion.cpp.

◆ na_ion

int na_ion

static

Definition at line 49 of file eion.cpp.

◆ scdoub

DoubScal scdoub[]

static

Initial value:

= {
                            "ci0_na_ion",
                            0,
                            "co0_na_ion",
                            0,
                            0,
                            0}

Definition at line 33 of file eion.cpp.

Macros

Functions

Variables

Macro Definition Documentation

◆ c

◆ charge

◆ conci

◆ conci0

◆ conco

◆ conco0

◆ cur

◆ dc

◆ dcurdv

◆ erev

◆ FARADAY

◆ gasconstant

◆ global_charge

◆ global_conci

◆ global_conco

◆ iontype

◆ ktf

◆ nparm

◆ VAL_SENTINAL

Function Documentation

◆ chkarg()

◆ efun()

◆ ghk()

◆ hoc_register_prop_size()

◆ ion_alloc()

◆ ion_charge()

◆ ion_cur()

◆ ion_init()

◆ ion_reg()

◆ ion_register()

◆ ion_style()

◆ nernst()

◆ nrn_check_conc_write()

◆ nrn_ghk()

◆ nrn_ion_charge()

◆ nrn_is_ion()

◆ nrn_nernst()

◆ nrn_nernst_coef()

◆ nrn_noerr_access()

◆ nrn_promote()

◆ nrn_vartype()

◆ nrn_verify_ion_charge_defined()

◆ nrn_wrote_conc()

◆ register_mech()

◆ second_order_cur()

Variable Documentation

◆ _faraday_

◆ _gasconstant_

◆ ca_ion

◆ ion_global_map

◆ ion_global_map_size

◆ k_ion

◆ mechanism

◆ na_ion

◆ scdoub